All modules for which code is available
- padmet.classes.instantiation
- padmet.classes.node
- padmet.classes.padmetRef
- padmet.classes.padmetSpec
- padmet.classes.policy
- padmet.classes.relation
- padmet.utils.connection.biggAPI_to_padmet
- padmet.utils.connection.check_orthology_input
- padmet.utils.connection.enhanced_meneco_output
- padmet.utils.connection.extract_orthofinder
- padmet.utils.connection.extract_rxn_with_gene_assoc
- padmet.utils.connection.gbk_to_faa
- padmet.utils.connection.gene_to_targets
- padmet.utils.connection.get_metacyc_ontology
- padmet.utils.connection.metexploreviz_export
- padmet.utils.connection.modelSeed_to_padmet
- padmet.utils.connection.padmet_to_asp
- padmet.utils.connection.padmet_to_matrix
- padmet.utils.connection.padmet_to_padmet
- padmet.utils.connection.padmet_to_tsv
- padmet.utils.connection.pgdb_to_padmet
- padmet.utils.connection.sbmlGenerator
- padmet.utils.connection.sbml_to_curation_form
- padmet.utils.connection.sbml_to_padmet
- padmet.utils.connection.sbml_to_sbml
- padmet.utils.connection.wikiGenerator
- padmet.utils.exploration.compare_padmet
- padmet.utils.exploration.compare_sbml
- padmet.utils.exploration.compare_sbml_padmet
- padmet.utils.exploration.convert_sbml_db
- padmet.utils.exploration.dendrogram_reactions_distance
- padmet.utils.exploration.flux_analysis
- padmet.utils.exploration.get_pwy_from_rxn
- padmet.utils.exploration.padmet_stats
- padmet.utils.exploration.prot2genome
- padmet.utils.exploration.report_network
- padmet.utils.exploration.visu_network
- padmet.utils.exploration.visu_path
- padmet.utils.exploration.visu_similarity_gsmn
- padmet.utils.gbr
- padmet.utils.management.manual_curation
- padmet.utils.management.padmet_compart
- padmet.utils.management.padmet_medium
- padmet.utils.management.relation_curation
- padmet.utils.sbmlPlugin